I'm Ben, a computational biologist and genomic detective.
Currently, I'm building the computational biology team at Pattern Biosciences. Pattern is developing "DNA computers" for cancer therapeutics, and I truly believe it's one of the most exciting and impactful biology problems of our time. More details at the company website and in my blog posts. We're always hiring across computational and synthetic biology.
Before that, I worked on computational infrastructure and data tooling at Deep Origin, and led the bioinformatics team at Loyal, an early-stage biotech startup dedicated to extending the lifespan and healthspan of dogs.
Previously, I did my PhD in Dr. Ami Bhatt's lab at Stanford University, where I used advanced genomic techniques to study the human microbiome. I'm proud to say I characterized the first examples of bacteria transmitted between the gut microbiome of adults and of phages transmitted from the gut microbiome of a mother to the gut microbiome of her infant.
Recent Blog Posts
- Reducing RNA-seq batch effects by re-aligning TCGA and GTEx 2025-11-11
- s3stasher simplifies using AWS S3 in python 2025-11-09
- Fixing a Milli-q purifier for 99% off 2025-08-05
- Does AMD 3D V-Cache help in bioinformatics? 2025-05-26
- Tail risk hedging with VIX calls (Stanford MSE448 final) 2025-05-25
- Cross-account AWS FSx for Lustre and S3 data repository associations 2023-12-06
- Introducing the ComputeBench: the cloud development environment for bioinformatics 2023-11-21
Computational biology research projects